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IGVFFI2403SOLQ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9590YCER(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 476
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX6-SC1_snATAC_S4_R1
md5sum
71ccd8521c6b6cba92f147cd71deede2
Content MD5sum
055c3e7f61ae0b23191684700d851f3f
File Size
7.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX6-SC1/BH2VM7DSX3/XHLT1-POOL-XX6-SC1-ATAC_S5_L004_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
476
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
230615187

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 18.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF