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INDEXED
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SequenceFile
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IGVFFI2400ZEEV
IGVFFI2400ZEEV
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2727UHPQ
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 470
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX5-SC4_snRNA_S1_I2
md5sum
a391bf51ca5594f60b85710e3732acfc
Content MD5sum
e1c809b7ead00f437967e638f43efd5f
File Size
1.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX5-SC4/AH2YMLDSX3_ICJY03/XHLT1-POOL-XX5-SC4-GEX_S4_L002_I2_001.fastq.gz
Checkfiles Version
v20
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
470
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
171905995
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2167TFTJ
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 42.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 32.0 years) peripheral blood mononuclear cell; ... and 17 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF