IGVFFI2400NRPA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2649MJUU(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G7_P072_L008_I1

md5sum

4c46494d861d920d400e73d40ec67109

Content MD5sum

0f078bbf5c62d3ec2c77da2a3cb59b67

File Size

982 MB

Submitted File Name

Multiome_RNA_X054_G7_L007_P072_S79_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

133264554

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5537DDNC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples