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INDEXED
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SequenceFile
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IGVFFI2389QNEB
IGVFFI2389QNEB
released
validated
Json view
File Set
IGVFDS9540QIQR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9036
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9036_R1
md5sum
cb06a80cb6546113d6f0b74776285dd6
Content MD5sum
05033f0dab7f9ef9de0ece29b7428046
File Size
15 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2290_L7_SS-PKR-178_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9036
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
310498
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5888ULVX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0074OGQD
yaml
seqspec
seqspec of IGVFFI2389QNEB, IGVFFI6744UDPO, IGVFFI0722YPSF
Jason Buenrostro, Broad
1.3 KB
validated