IGVFFI2388IYMA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2689NPPZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G8_P056_L004_I1

md5sum

fa4ec63086e06af8cd54e2ecde710eac

Content MD5sum

1878377fba5898fbd822c8d4a88bfea6

File Size

347 MB

Submitted File Name

Multiome_RNA_RP007_G8_L008_P056_S36_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

60599827

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0124BONK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples