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IGVFFI2380OHVF

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5867EPVA(scRNA-seq)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20240212_GEX_NGS_1_LAF7052A8_L004_I1
md5sum
966282bdd20c4a60b26eb669927becd6
Content MD5sum
aa20267775fb2190d76ff186b41e640e
File Size
1.8 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20240318_PerturbSeq_2/Singh_021224_1_Pool_5Pv2_GEX_LAF7052A8_S28_L004_I1_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
304123308

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 12 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
1.2 GB
validated