IGVFFI2371MKDN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1494LZKD(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G6_P052_L003_I1

md5sum

98cf1e4fe448e20f13671bdaba0ae5e9

Content MD5sum

87e772cea4d38865d1a88bcfb3e9c08a

File Size

528 MB

Submitted File Name

Multiome_RNA_RP002_G6_L006_P052_S14_L003_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

95186689

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9681MUTW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples