IGVFFI2367ZNHF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0930ZDXI(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X048_G3_P049_L001_R2

md5sum

85494ab4740a822a65401af59f325fbd

Content MD5sum

4816ec461c1f371dd6972f2ec5f7cdff

File Size

4.8 GB

Submitted File Name

Multiome_ATAC_X048_G3_L003_P049_S7_L001_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

236554491

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0811HBAI

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples