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INDEXED
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SequenceFile
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IGVFFI2365DYTQ
IGVFFI2365DYTQ
released
validated
Json view
File Set
IGVFDS9449UYYC
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 8428
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8428_R2
md5sum
58d55ed51524609ec98aec9ffcab0e3a
Content MD5sum
c39fe1edd3e9450dafaa02f19d0f427f
File Size
8.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2248_L3_SS-PKR-607_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8428
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
112848907
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0974PFBP
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2867QOJN
yaml
seqspec
seqspec of IGVFFI4694JRSB, IGVFFI2365DYTQ
Jason Buenrostro, Broad
1.3 KB
validated