IGVFFI2364MYCD

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validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3465JQXG(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_CAAC-THP1-BioRep2-FFrep1-FACS_Input-PCRrep2_R1
md5sum
eaa7d13f19832fce99a7eb4c53b5fe1c
Content MD5sum
0dcb9311eaad7b3dcae6d264a9f30339
File Size
47 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C11-Amp_PPIF_5splicesite-BioRep2-FFrep1-BinAll-PCRrep2_S985_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R1
Index
CCAGCACC:AGGTGCGT
Average Read Length
151
Read Count
2159567

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution