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SequenceFile
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IGVFFI2359RIJP
IGVFFI2359RIJP
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6624LIQT
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 158
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX13-SC1_snATAC_S5_R1
md5sum
191f4e858fcebeec6e8eb14dd8486a13
Content MD5sum
be5e1b44db756f7b99089f171cd60949
File Size
5.8 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX13-SC1/AHY3H2DSX2_ATAC/XHLT1-POOL-XX13-SC1-ATAC_S15_L004_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
158
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
182672342
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9333JIPE
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples