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SequenceFile
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IGVFFI2352SZMI
IGVFFI2352SZMI
released
validated
Json view
File Set
IGVFDS9151XHFL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5374
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5374_R1
md5sum
84d880cad07c18182568ce8b5608b700
Content MD5sum
5db1232deb238028f9afd67966228ceb
File Size
8.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1588_L4_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5374
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
180960125
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2261FPNI
yaml
seqspec
seqspec of IGVFFI2352SZMI, IGVFFI0129OQOG
Jason Buenrostro, Broad
1.3 KB
validated