IGVFFI2346ZFCS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5571RDTA(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G7_P062_L006_R2

md5sum

09498ea8478585ca0eefd55885e1d549

Content MD5sum

a0ea9b3d8b4744309bf7fe31e9e80288

File Size

2.4 GB

Submitted File Name

Multiome_RNA_RP013_G7_L007_P062_S27_L006_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

56778638

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7012MRMQ

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples