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SequenceFile
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IGVFFI2345NVUQ
IGVFFI2345NVUQ
released
validated
Json view
File Set
IGVFDS6703CAXM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3976
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3976_R1
md5sum
1c5ff23e81c90a8c3034519c41ee8159
Content MD5sum
ecc2f9868d653e03a2062b4b3bb43363
File Size
907 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-707_L7_SS-PKR-199_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3976
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
16826436
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4257RJVD
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4855YFQU
yaml
seqspec
seqspec of IGVFFI2345NVUQ, IGVFFI5792FBXI, IGVFFI3375PBFA
Jason Buenrostro, Broad
1.4 KB
validated