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IGVFFI2337CWXJ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4024LHFB(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:donor1_Bcell_multiome_ATAC_NGS_day0_2_L001_I1
md5sum
0459d1aa09c221b67cedccb8a7a62cd3
Content MD5sum
3de19e9bf9a4a60a601b64cb6def2c7d
File Size
914 MB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/fastqs/scATAC/NP002_01_120222_Singh_Multiome_scATAC_remade_SIN4251A4_S1_L001_I1_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq 6000 S1 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
8
Read Count
130902645

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days

Files Derived From This File

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.8 GB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
393 MB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated