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INDEXED
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SequenceFile
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IGVFFI2327RETF
IGVFFI2327RETF
released
validated
Json view
File Set
IGVFDS0412WLCW
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_102_atac_r2
md5sum
a2b4325135cfdd98cbe6ad19232ca86b
Content MD5sum
f6b5e1e7be9cfafb0a38a99d74fb470a
File Size
8.3 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/ATAC/ATAC_102_S2_L001_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7LKDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
474620896
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9059AKNM
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female, 10 weeks) left cerebral cortex tissue
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7052NJFS
yaml
seqspec
seqspec of IGVFFI9476EXNQ, IGVFFI2327RETF, IGVFFI1860TEYU, IGVFFI8292SITB
Ansuman Satpathy, Stanford
1.4 KB
validated