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INDEXED
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SequenceFile
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IGVFFI2327MHEX
IGVFFI2327MHEX
released
validated
Json view
File Set
IGVFDS7928ECWE
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P006-R2
md5sum
ceb770120be4c381bf0864c469aa6be8
Content MD5sum
dbfb4cbd0bee6386258e2d6042ea7555
File Size
6.7 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool6.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
42663100
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5583ZTQT
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.4 GB
validated
IGVFFI7460TNNU
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.7 GB
validated