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IGVFFI2327DFZG

released
validated
File Set
IGVFDS1680VACI(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS16-prim-9K-1-ATAC.R1.fastq.gz
md5sum
45cca4da052a48e88fdb8203677390a6
Content MD5sum
0e170372ce111772bb65df0439c52010
File Size
4.1 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS16-prim-9K-1-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS16-prim-9k-1_P1.49
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
89.27
Read Count
81698603

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7719OGVL, IGVFFI2327DFZG, IGVFFI6721AYTQ
Jason Buenrostro, Broad
1.2 KB
validated