IGVFFI2313XGJR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4665BFMR(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G7_P060_L005_R2

md5sum

cd4381d825b16f376193424145f5cbe8

Content MD5sum

450ce8f608e28708f95b4c4e1d59a14c

File Size

2.2 GB

Submitted File Name

Multiome_RNA_RP012_G7_L007_P060_S39_L005_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

52151494

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6267UURV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples