Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2302SLNH
IGVFFI2302SLNH
released
validated
Json view
File Set
IGVFDS9728TWXO
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 253
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2055_R2
bradley-bernstein:SS-LS_253_R2
buenrostro-bernstein:SS-LS_2055_R2
buenrostro-bernstein:SS-LS_253_R2
md5sum
5e11f7ef0c550185e2232b7974a7dfc2
Content MD5sum
d93352e66fb8b4a83a1bcd769b032fbe
File Size
362 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-184_L1_SS-PKR-132_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
253
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
7041153
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8883WYCA
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8541ZMMO
yaml
seqspec
seqspec of IGVFFI3794YMRL, IGVFFI2302SLNH
Jason Buenrostro, Broad
1.2 KB
validated