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IGVFFI2302SLNH

released
validated
File Set
IGVFDS9728TWXO(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 253
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2055_R2
bradley-bernstein:SS-LS_253_R2
buenrostro-bernstein:SS-LS_2055_R2
buenrostro-bernstein:SS-LS_253_R2
md5sum
5e11f7ef0c550185e2232b7974a7dfc2
Content MD5sum
d93352e66fb8b4a83a1bcd769b032fbe
File Size
362 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-184_L1_SS-PKR-132_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
253
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
7041153

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3794YMRL, IGVFFI2302SLNH
Jason Buenrostro, Broad
1.2 KB
validated