Home

IGVFFI2299VFNH

released
validated
File Set
IGVFDS5682MSPJ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2288
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2288_R1
buenrostro-bernstein:SS-LS_2288_R1
md5sum
df133c7b656ba714ce87b8e76d1f03f0
Content MD5sum
f435917c8609906633532ed2fbf79a1d
File Size
475 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-52_L1_SS-PKR-5_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2288
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
23535110

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad