IGVFFI2296CSKM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9129KQZH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G1_P060_L007_R2

md5sum

400bcabf3111838602e1186fec7fae7e

Content MD5sum

09bfc76086bb4762994ff34da1c82a38

File Size

2.6 GB

Submitted File Name

Multiome_RNA_RP012_G1_L001_P060_S33_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

63720019

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3122KACM

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples