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INDEXED
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SequenceFile
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IGVFFI2292HJJA
IGVFFI2292HJJA
released
validated
Json view
File Set
IGVFDS2510NXJE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 979
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_979_R1
md5sum
3e12d0a7ab2a28c2608a729a8a14fe25
Content MD5sum
b833fb51bd3874c062aea12f1aa428a0
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-950_L2_SS-PKR-181_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
979
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
20851547
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0579ZDSX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 181)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1512EBBS
yaml
seqspec
seqspec of IGVFFI2292HJJA, IGVFFI8881YFZG, IGVFFI9538DCJK
Jason Buenrostro, Broad
1.3 KB
validated