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INDEXED
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SequenceFile
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IGVFFI2284LXEV
IGVFFI2284LXEV
released
validated
Json view
File Set
IGVFDS0412JTFG
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 835
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_835_R1
md5sum
5dafc0026db7543a7d91290a6b8e1fd9
Content MD5sum
9d2a2ce71356811d8371ddfe67fb7163
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-890_L5_SS-PKR-171_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
835
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
18919461
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0517GAWB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2982JNAX
yaml
seqspec
seqspec of IGVFFI2284LXEV, IGVFFI4704WIZI, IGVFFI7298DRXZ
Jason Buenrostro, Broad
1.4 KB
validated