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INDEXED
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SequenceFile
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IGVFFI2267OGVG
IGVFFI2267OGVG
released
validated
Json view
File Set
IGVFDS0826VLKA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8605
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8605_R1
md5sum
d22a3aa4ed9e7645eea667af6a2342ed
Content MD5sum
188a9960715127360269e2f7c1a8a16a
File Size
714 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2339_L2_SS-PKR-206_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8605
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15829153
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7848MXIA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5493IBGB
yaml
seqspec
seqspec of IGVFFI2267OGVG, IGVFFI0694HAYA, IGVFFI2082YTRX
Jason Buenrostro, Broad
1.3 KB
validated