IGVFFI2250AHGL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0198YHSP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X012_G4_P010_L002_I2

md5sum

aa51d1e10c93c6160f6348a26e7c1ced

Content MD5sum

171d2690e2f6f2c88ae36afc7332b9e3

File Size

2.2 GB

Submitted File Name

Multiome_RNA_X012_G4_L004_P010_S14_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

326052919

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9021MNYU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue; Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples