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IGVFFI2246DGFE

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3666WZCD(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 467
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX5-SC4_snATAC_S3_R1
md5sum
0b14b50435cf6e5d1b21c515b55b525e
Content MD5sum
6bc4a66dd644948ab2515e8999ef7c3a
File Size
5.7 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX5-SC4/BH2VM7DSX3/XHLT1-POOL-XX5-SC4-ATAC_S4_L003_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
467
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
184379459

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 42.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 32.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF