Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2243SPLE
IGVFFI2243SPLE
released
validated
Json view
File Set
IGVFDS0095QJOI
(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
e6bf78bf989c8aaec80bc97575c6fd2d
Content MD5sum
9eac2f4869abb6166d4a32976cadb832
File Size
12 GB
Submitted File Name
igvf_b01/next1/igvf_b01_B06_D_next_N1_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC2L2NHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
140
Read Count
161393040
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6546CQJB
MultiplexedSample
left cerebral cortex
multiplexed sample: Mus musculus CAST/EiJ (female, 72 days) left cerebral cortex tissue; Mus musculus C57BL/6J (male, 72 days) left cerebral cortex tissue; ... and 6 more samples
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1237TMFC
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
435 MB
validated
IGVFFI9129YSJW
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
435 MB
validated