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IGVFFI2237ZBRX

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7029XULI(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX1-SC1_snATAC_S2_R1
md5sum
d1de339d336d681d46103eb3c1ee9633
Content MD5sum
fc2e36052f0f6a2b2a35c20da9d97a81
File Size
5.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX1-SC1/BHM2VLDSX2/XHLT1-POOL-XX1-SC1-ATAC_S1_L002_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
170607425

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 39.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF