IGVFFI2237FSSO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2960OTKR(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X033_G7_P034_L002_R2

md5sum

379ceb55ed492fbd49edfe962670cc38

Content MD5sum

8af74a69570852639ff0793d8a60b016

File Size

12 GB

Submitted File Name

Multiome_RNA_X033_G7_L007_P034_S23_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

223985039

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7219TNMN

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue; ... and 10 more samples