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IGVFFI2235MCOP

released
validated
File Set
IGVFDS5218TYLY(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
ab6a95e43234701e4feac682e627517c
Content MD5sum
d91276cf7cc33838cb878b3bec95862e
File Size
17 GB
Submitted File Name
igvf_010/nextseq2/igvf_010_B07_E_next_N2_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC3JCNHV
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
140
Read Count
221200180

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
190 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2235MCOP, IGVFFI3650UECM
Ali Mortazavi, UCI
1.3 KB
validated