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IGVFFI2233SDVD

released
validated
File Set
IGVFDS0956TMWA(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 250
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2058_R2
bradley-bernstein:SS-LS_250_R2
buenrostro-bernstein:SS-LS_2058_R2
buenrostro-bernstein:SS-LS_250_R2
md5sum
1c80943adb669249e3f7bc1556a44e3a
Content MD5sum
ff899f361a950380531bf13f743c7930
File Size
355 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-187_L1_SS-PKR-131_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
250
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
6847400

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.3 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
887 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7404RARD, IGVFFI2233SDVD
Jason Buenrostro, Broad
1.2 KB
validated