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INDEXED
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SequenceFile
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IGVFFI2224QAWI
IGVFFI2224QAWI
released
validated
Json view
File Set
IGVFDS4803WKTQ
(Parse SPLiT-seq)
Summary
reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
7425dfe4ef2e843d7ea29d648f72a2cd
Content MD5sum
a7a59ae18d1cdf1f0bd2085e1c941024
File Size
83 GB
Submitted File Name
igvf_b01/nanopore_p2/igvfb01_13G-gc_lig-ss_11.fastq.gz
Sequencing Details
Sequencing Platform
ONT PromethION 2 Solo
Sequencing Run
1
Sequencing Kit
ONT Ligation Sequencing Kit V14
Average Read Length
865
Read Count
105591654
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8722YQAW
MultiplexedSample
left cerebral cortex
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples
Files This File Derives From
1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI3397RQUC
IGVFDS4803WKTQ
pod5
Nanopore reads
Ali Mortazavi, UCI
1.1 TB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI