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INDEXED
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SequenceFile
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IGVFFI2221EFRC
IGVFFI2221EFRC
released
validated
Json view
File Set
IGVFDS8623UWKX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 3845
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3845_R2
md5sum
fb35d3dd383964e1e9af7f569aa2253e
Content MD5sum
84f414ec0e76dbabd0fd6208616bf063
File Size
903 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1536_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3845
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
11107596
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5881EHHY
yaml
seqspec
seqspec of IGVFFI0309CZNF, IGVFFI2221EFRC
Jason Buenrostro, Broad
1.3 KB
validated