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INDEXED
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SequenceFile
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IGVFFI2216CFQE
IGVFFI2216CFQE
released
validated
Json view
File Set
IGVFDS4468RMYH
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9108
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9108_R1
md5sum
1a05deb16e432e9088cef7da44a51b82
Content MD5sum
465374446ebb69646ebb70470a6a8751
File Size
759 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2266_L8_SS-PKR-171_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9108
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15490
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7278VIVW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6797ANNI
yaml
seqspec
seqspec of IGVFFI2216CFQE, IGVFFI6734SJYE, IGVFFI8390GDDZ
Jason Buenrostro, Broad
1.3 KB
validated