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IGVFFI2212PUCT

released
validated
File Set
IGVFDS5336NFHE(CRISPR HiCAR integrating a non-targeting guide (sgRNA) library)
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-control-0umETt1-ipsc-cm-targeted-hicar-rep2-R1
md5sum
6ef8d54bd1568b77385c71de720ba04b
Content MD5sum
0cc1617c9984f48f6e978739c00270ae
File Size
889 MB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_human/crispra_hicar_human_fastq/H_vp64_r2_NT_3_noET1_ds.f0e569cf39554b3c9b96c2e5c7b64a02/H_vp64_r2_NT_3_noET1_S2_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
17385192

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
34 MB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke