IGVFFI2186GWUQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5652INCZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G6_P056_L004_R1

md5sum

e480b1f9c9ce336bb5e45b550f2041d6

Content MD5sum

6206bb55720dd9ff938781fb12f12cbb

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP007_G6_L006_P056_S34_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

59973952

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1887PDIV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples