IGVFFI2177GQHU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6105WUJZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G8_P062_L007_R1

md5sum

a532235d25c40c1035c92d2d98148ad6

Content MD5sum

dba8522960d2061b9e32e0f52ee7578e

File Size

1.5 GB

Submitted File Name

Multiome_RNA_RP013_G8_L008_P062_S28_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

77234053

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7640TBFV

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples