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INDEXED
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SequenceFile
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IGVFFI2158AGZC
IGVFFI2158AGZC
released
validated
Json view
File Set
IGVFDS3368OEWN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5359
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5359_R1
md5sum
899bc0dfddab511946e91ece2dccd79a
Content MD5sum
1f75ca900cd6a013812a8d6d877ec549
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1574_L1_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5359
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
166837446
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7751PYOZ
yaml
seqspec
seqspec of IGVFFI2158AGZC, IGVFFI8157LACK
Jason Buenrostro, Broad
1.3 KB
validated