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INDEXED
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SequenceFile
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IGVFFI2155GZZK
IGVFFI2155GZZK
released
validated
Json view
File Set
IGVFDS3368OEWN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5369
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5369_R1
md5sum
7476dca3dd06c3355927ee36cdb77db0
Content MD5sum
d3118b15f8cc462569cd9f9d0a14ab7a
File Size
7.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1574_L3_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5369
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
169992605
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3482LXVK
yaml
seqspec
seqspec of IGVFFI2155GZZK, IGVFFI4097YIVB
Jason Buenrostro, Broad
1.3 KB
validated