Home

IGVFFI2154ZKGX

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3564YOOG(gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:sequence_files-TeloHAEC_Perturb-seq_2kG-Dialout_2kg_11AMDox_5_TCCGGAGA_L001_R1_001.fastq.gz
md5sum
bfe92226156dcc86da709db57fb9a2db
Content MD5sum
35008524f2a4eda0e9f7c0a2fa857354
File Size
502 MB
Submitted File Name
/oak/stanford/groups/engreitz/Users/gschnitz/dialout_files_for_helen/Dialout_2kg_11AMDox_5_TCCGGAGA_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Sequencing Kit
NextSeq 500/550 High-Output v2.5 Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
24178873

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford