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INDEXED
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SequenceFile
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IGVFFI2143XBQS
IGVFFI2143XBQS
released
validated
Json view
File Set
IGVFDS1592MBRQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5377
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5377_R2
md5sum
95ba4253ce2420017cf93901d0601e12
Content MD5sum
e44317d4de28ad5cd1df10dc1b222036
File Size
12 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1591_L4_SS-PKR-435_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5377
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
162422868
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4121TWUU
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8746NBNF
yaml
seqspec
seqspec of IGVFFI7373BZSM, IGVFFI2143XBQS
Jason Buenrostro, Broad
1.3 KB
validated