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INDEXED
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SequenceFile
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IGVFFI2142OYFW
IGVFFI2142OYFW
released
validated
Json view
File Set
IGVFDS1589ODOW
(reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R3 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
dbb4f3cbdb1045085b9162c2dfbb1102
Content MD5sum
9a0d3e12712912d618b9118e80172fd6
File Size
10 GB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/association/run2/Max_ass_S1_R3_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun2
Attribution
Nadav Ahituv, UCSF
(
HG011966
—
Jay Shendure
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 500
Sequencing Run
2
Sequencing Kit
NextSeq 500 Mid Output v2 Kit
Illumina Read Type
R3
Average Read Length
146
Read Count
102187076
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6803EINC
tsv
barcode to element mapping
GRCh38 barcode to element mapping
Nadav Ahituv, UCSF
728 MB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7954ERXG
yaml
seqspec
seqspec of IGVFFI7003XVUG, IGVFFI5231ATBS, IGVFFI0921LXBF, IGVFFI8640LLIG, IGVFFI0576IRDC, IGVFFI6354NJGB, IGVFFI4403ENTR, IGVFFI2142OYFW, IGVFFI6807PKQA
Nadav Ahituv, UCSF
1.8 KB
validation exempted