IGVFFI2134RPLC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4044NLZW(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X031_G8_P032_L004_I1

md5sum

e33c5e28bb0ab8369cca3a63d8a80a6f

Content MD5sum

44eafd649d6a92ea50f08f5f8a274bf0

File Size

1.7 GB

Submitted File Name

Multiome_RNA_X031_G8_L008_P032_S50_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV7VHDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

261930901

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0804HOWT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 80 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples