IGVFFI2133XKJF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9815DKHR(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G2_P006_L002_I1

md5sum

6f121a96fc7de995012786d7c140077a

Content MD5sum

c2baa3e40cd99b541db4cb37a6ca5f5a

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X007_G2_L002_P006_S12_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

266151801

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1022ULLW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples