Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2129SFDS
IGVFFI2129SFDS
released
validated
Json view
File Set
IGVFDS1861QPYY
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8315
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8315_R2
md5sum
582761b4c6a30d0bff39572eb69f87df
Content MD5sum
b08b91a6369c9a3f0d4dc11946001412
File Size
13 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2161_L1_SS-PKR-576_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8315
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
221273782
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5470EUSZ
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9555JXAV
yaml
seqspec
seqspec of IGVFFI8487UHPC, IGVFFI2129SFDS
Jason Buenrostro, Broad
1.3 KB
validated