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INDEXED
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SequenceFile
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IGVFFI2124TDMK
IGVFFI2124TDMK
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9782RBTD
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 252
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC3_snRNA_S2_I2
md5sum
3c751160510026fd2e697100324e8c31
Content MD5sum
b733055320dcf8e8bc0115ffff70ca29
File Size
1.7 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX16-SC3/BH73JJDSX3_ICJY07/XHLT1-POOL-XX16-SC3-GEX_S10_L003_I2_001.fastq.gz
Checkfiles Version
v20
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
252
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
245153108
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7058GGSU
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF