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INDEXED
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SequenceFile
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IGVFFI2117MTOZ
IGVFFI2117MTOZ
released
validated
Json view
File Set
IGVFDS5473KODL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4071
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4071_R1
md5sum
335c0fedc35cd4bf8d8f113e5ae9d494
Content MD5sum
925963433d079c74052605d6fb73b051
File Size
2.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-728_L3_SS-PKR-180_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4071
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
50625101
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7279BVJC
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8531MLER
yaml
seqspec
seqspec of IGVFFI2117MTOZ, IGVFFI6481CWWZ, IGVFFI8574OSAV
Jason Buenrostro, Broad
1.3 KB
validated