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INDEXED
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SequenceFile
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IGVFFI2108UTKE
IGVFFI2108UTKE
released
validated
Json view
File Set
IGVFDS6090OHVV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1024
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_1024_R1
md5sum
7a1acfa193b6a646642f40c508e83223
Content MD5sum
70404a7f286e789eaf592e5f4de7a22f
File Size
1.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-953_L3_SS-PKR-181_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1024
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
29522413
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6240YVGY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 181)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2431EJVA
yaml
seqspec
seqspec of IGVFFI2108UTKE, IGVFFI8437OFJQ, IGVFFI5555DQTF
Jason Buenrostro, Broad
1.3 KB
validated