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INDEXED
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SequenceFile
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IGVFFI2096IXKK
IGVFFI2096IXKK
released
validated
Json view
File Set
IGVFDS9089INXN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8826
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8826_R1
md5sum
404da6e377b2423a692b522881963c59
Content MD5sum
1878288b4bdd52667bd5614d0e41c039
File Size
218 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2272_L5_SS-PKR-173_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8826
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
4755752
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3431GUCA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4005TFFS
yaml
seqspec
seqspec of IGVFFI2096IXKK, IGVFFI3373HMDV, IGVFFI2626MUTH
Jason Buenrostro, Broad
1.3 KB
validated